Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Gm4968-201ENSMUST00000071458 858 ntBASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clhc1Q5M6W3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clhc1Q5M6W3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Gm2559-201ENSMUST00000201323 363 ntBASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Flg-201ENSMUST00000050758 1488 ntBASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clhc1Q5M6W3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms