Protein–RNA interactions for Protein: Q505G4

Rtl6, Retrotransposon Gag-like protein 6, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl6Q505G4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rtl6Q505G4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rtl6Q505G4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.36□□□□□ -0.11
Rtl6Q505G4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rtl6Q505G4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Gm16061-201ENSMUST00000122167 857 ntBASIC14.34□□□□□ -0.11
Rtl6Q505G4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Gm18032-201ENSMUST00000222541 538 ntBASIC14.34□□□□□ -0.11
Rtl6Q505G4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtl6Q505G4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rtl6Q505G4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rtl6Q505G4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Rtl6Q505G4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtl6Q505G4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtl6Q505G4 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.33□□□□□ -0.12
Rtl6Q505G4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rtl6Q505G4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtl6Q505G4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtl6Q505G4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtl6Q505G4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.33□□□□□ -0.12
Rtl6Q505G4 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms