Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm4Q4VBF2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm4Q4VBF2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.17■□□□□ 0.5
R3hdm4Q4VBF2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
R3hdm4Q4VBF2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.17■□□□□ 0.5
R3hdm4Q4VBF2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm4Q4VBF2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm4Q4VBF2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm4Q4VBF2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.17■□□□□ 0.5
R3hdm4Q4VBF2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm4Q4VBF2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Gm10013-201ENSMUST00000106074 672 ntBASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
R3hdm4Q4VBF2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.15■□□□□ 0.5
R3hdm4Q4VBF2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
R3hdm4Q4VBF2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
R3hdm4Q4VBF2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
R3hdm4Q4VBF2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
R3hdm4Q4VBF2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
R3hdm4Q4VBF2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
R3hdm4Q4VBF2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
R3hdm4Q4VBF2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
R3hdm4Q4VBF2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
R3hdm4Q4VBF2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
R3hdm4Q4VBF2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Gm27389-201ENSMUST00000183622 195 ntBASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
R3hdm4Q4VBF2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms