Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cracr2aQ3UP38 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cracr2aQ3UP38 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Gm10013-201ENSMUST00000106074 672 ntBASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cracr2aQ3UP38 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Gm18958-201ENSMUST00000174258 762 ntBASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Gm18101-201ENSMUST00000215769 548 ntBASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cracr2aQ3UP38 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cracr2aQ3UP38 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cracr2aQ3UP38 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cracr2aQ3UP38 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cracr2aQ3UP38 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Cracr2aQ3UP38 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cracr2aQ3UP38 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cracr2aQ3UP38 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cracr2aQ3UP38 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cracr2aQ3UP38 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cracr2aQ3UP38 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cracr2aQ3UP38 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cracr2aQ3UP38 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.33■□□□□ 0.52
Cracr2aQ3UP38 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cracr2aQ3UP38 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cracr2aQ3UP38 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms