Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.83■□□□□ 0.77
Rnf180Q3U827 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf180Q3U827 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf180Q3U827 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf180Q3U827 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf180Q3U827 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf180Q3U827 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf180Q3U827 Gm44492-201ENSMUST00000197012 141 ntBASIC19.83■□□□□ 0.77
Rnf180Q3U827 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.83■□□□□ 0.77
Rnf180Q3U827 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.83■□□□□ 0.77
Rnf180Q3U827 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf180Q3U827 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf180Q3U827 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.83■□□□□ 0.76
Rnf180Q3U827 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.82■□□□□ 0.76
Rnf180Q3U827 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf180Q3U827 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf180Q3U827 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf180Q3U827 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.82■□□□□ 0.76
Rnf180Q3U827 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf180Q3U827 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.82■□□□□ 0.76
Rnf180Q3U827 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf180Q3U827 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Rnf180Q3U827 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rnf180Q3U827 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rnf180Q3U827 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf180Q3U827 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf180Q3U827 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf180Q3U827 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf180Q3U827 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf180Q3U827 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf180Q3U827 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf180Q3U827 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf180Q3U827 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.8■□□□□ 0.76
Rnf180Q3U827 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.8■□□□□ 0.76
Rnf180Q3U827 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf180Q3U827 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.8■□□□□ 0.76
Rnf180Q3U827 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.8■□□□□ 0.76
Rnf180Q3U827 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.8■□□□□ 0.76
Rnf180Q3U827 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.8■□□□□ 0.76
Rnf180Q3U827 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf180Q3U827 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf180Q3U827 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.8■□□□□ 0.76
Rnf180Q3U827 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf180Q3U827 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Rnf180Q3U827 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.79■□□□□ 0.76
Rnf180Q3U827 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.79■□□□□ 0.76
Rnf180Q3U827 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf180Q3U827 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rnf180Q3U827 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf180Q3U827 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf180Q3U827 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rnf180Q3U827 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf180Q3U827 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.78■□□□□ 0.76
Rnf180Q3U827 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf180Q3U827 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC19.78■□□□□ 0.76
Rnf180Q3U827 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Rnf180Q3U827 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf180Q3U827 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rnf180Q3U827 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Rnf180Q3U827 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf180Q3U827 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf180Q3U827 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf180Q3U827 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf180Q3U827 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf180Q3U827 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf180Q3U827 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf180Q3U827 Gm22175-201ENSMUST00000175007 78 ntBASIC19.77■□□□□ 0.76
Rnf180Q3U827 Gm27622-201ENSMUST00000183779 60 ntBASIC19.77■□□□□ 0.76
Rnf180Q3U827 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf180Q3U827 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf180Q3U827 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf180Q3U827 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf180Q3U827 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Rnf180Q3U827 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms