Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim63Q38HM4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim63Q38HM4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14□□□□□ -0.17
Trim63Q38HM4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14□□□□□ -0.17
Trim63Q38HM4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim63Q38HM4 Serp2-204ENSMUST00000228055 705 ntBASIC14□□□□□ -0.17
Trim63Q38HM4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trim63Q38HM4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trim63Q38HM4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim63Q38HM4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.99□□□□□ -0.17
Trim63Q38HM4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim63Q38HM4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Gm7332-201ENSMUST00000118351 454 ntBASIC13.98□□□□□ -0.17
Trim63Q38HM4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim63Q38HM4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim63Q38HM4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim63Q38HM4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.97□□□□□ -0.17
Trim63Q38HM4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim63Q38HM4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms