Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ush2AQ2QI47 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ush2AQ2QI47 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ush2AQ2QI47 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ush2AQ2QI47 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Ush2AQ2QI47 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ush2AQ2QI47 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Ush2AQ2QI47 AC153962.4-201ENSMUST00000217878 242 ntBASIC9□□□□□ -0.97
Ush2AQ2QI47 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ush2AQ2QI47 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ush2AQ2QI47 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Ush2AQ2QI47 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Gm31326-201ENSMUST00000191856 1048 ntBASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Gm8655-201ENSMUST00000221159 852 ntBASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Mir449b-201ENSMUST00000104833 80 ntBASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 AC131709.1-201ENSMUST00000224731 1180 ntBASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Gm45747-201ENSMUST00000212203 999 ntBASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ush2AQ2QI47 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm5682-201ENSMUST00000173402 505 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm5837-201ENSMUST00000191844 1369 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm22065-201ENSMUST00000103753 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm22066-201ENSMUST00000103761 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm24932-201ENSMUST00000103763 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm24115-201ENSMUST00000103799 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm22190-201ENSMUST00000103827 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm22191-201ENSMUST00000103831 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm24721-201ENSMUST00000103849 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm28018-201ENSMUST00000103869 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm26399-201ENSMUST00000103937 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm25349-201ENSMUST00000177728 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm23616-201ENSMUST00000177797 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm25871-201ENSMUST00000177816 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm24752-201ENSMUST00000178240 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm24496-201ENSMUST00000178287 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm25649-201ENSMUST00000178476 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm25548-201ENSMUST00000178681 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm23147-201ENSMUST00000178841 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm26095-201ENSMUST00000179270 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm22171-201ENSMUST00000179283 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm23936-201ENSMUST00000179354 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm22619-201ENSMUST00000179516 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm25255-201ENSMUST00000179579 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm24755-201ENSMUST00000179691 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm26506-201ENSMUST00000179692 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm25086-201ENSMUST00000179931 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm23243-201ENSMUST00000180047 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm24659-201ENSMUST00000180212 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm24169-201ENSMUST00000180244 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm23689-201ENSMUST00000180354 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm27359-201ENSMUST00000184153 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm27785-201ENSMUST00000184268 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm27466-201ENSMUST00000184396 110 ntBASIC8.98□□□□□ -0.97
Ush2AQ2QI47 Gm27703-201ENSMUST00000184836 110 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms