Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.99■□□□□ 0.47
Col19a1Q0VF58 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.99■□□□□ 0.47
Col19a1Q0VF58 Grk6-206ENSMUST00000224995 2971 ntBASIC17.99■□□□□ 0.47
Col19a1Q0VF58 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Mir3113-201ENSMUST00000175478 76 ntBASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col19a1Q0VF58 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Gm14701-201ENSMUST00000117156 348 ntBASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.97■□□□□ 0.47
Col19a1Q0VF58 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.96■□□□□ 0.47
Col19a1Q0VF58 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.96■□□□□ 0.47
Col19a1Q0VF58 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.96■□□□□ 0.47
Col19a1Q0VF58 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col19a1Q0VF58 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Gm11780-201ENSMUST00000136880 516 ntBASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Gm43438-201ENSMUST00000198133 379 ntBASIC17.95■□□□□ 0.46
Col19a1Q0VF58 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col19a1Q0VF58 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col19a1Q0VF58 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms