Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm43474-201ENSMUST00000196415 774 ntBASIC26.02■■□□□ 1.76
Col17a1Q07563 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Col17a1Q07563 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC26.02■■□□□ 1.76
Col17a1Q07563 AC140397.2-201ENSMUST00000224213 834 ntBASIC26.02■■□□□ 1.76
Col17a1Q07563 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Col17a1Q07563 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col17a1Q07563 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
Col17a1Q07563 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Col17a1Q07563 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC26.01■■□□□ 1.75
Col17a1Q07563 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC26.01■■□□□ 1.75
Col17a1Q07563 Gm42934-201ENSMUST00000196920 1345 ntBASIC26.01■■□□□ 1.75
Col17a1Q07563 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col17a1Q07563 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col17a1Q07563 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col17a1Q07563 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Col17a1Q07563 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Col17a1Q07563 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col17a1Q07563 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC26■■□□□ 1.75
Col17a1Q07563 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col17a1Q07563 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col17a1Q07563 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC26■■□□□ 1.75
Col17a1Q07563 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col17a1Q07563 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col17a1Q07563 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col17a1Q07563 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC26■■□□□ 1.75
Col17a1Q07563 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col17a1Q07563 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col17a1Q07563 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Col17a1Q07563 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC25.99■■□□□ 1.75
Col17a1Q07563 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Col17a1Q07563 Mir6990-201ENSMUST00000183724 91 ntBASIC25.99■■□□□ 1.75
Col17a1Q07563 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC25.99■■□□□ 1.75
Col17a1Q07563 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Col17a1Q07563 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Col17a1Q07563 Gm19721-201ENSMUST00000195284 1764 ntBASIC25.99■■□□□ 1.75
Col17a1Q07563 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Col17a1Q07563 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC25.98■■□□□ 1.75
Col17a1Q07563 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC25.98■■□□□ 1.75
Col17a1Q07563 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col17a1Q07563 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col17a1Q07563 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Col17a1Q07563 Gm25857-201ENSMUST00000082788 129 ntBASIC25.98■■□□□ 1.75
Col17a1Q07563 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col17a1Q07563 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col17a1Q07563 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Col17a1Q07563 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col17a1Q07563 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col17a1Q07563 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col17a1Q07563 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Col17a1Q07563 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC25.98■■□□□ 1.75
Col17a1Q07563 Gm8655-201ENSMUST00000221159 852 ntBASIC25.98■■□□□ 1.75
Col17a1Q07563 AC124732.2-201ENSMUST00000221977 316 ntBASIC25.98■■□□□ 1.75
Col17a1Q07563 Wdyhv1-203ENSMUST00000226889 394 ntBASIC25.98■■□□□ 1.75
Col17a1Q07563 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Col17a1Q07563 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col17a1Q07563 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col17a1Q07563 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Col17a1Q07563 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Col17a1Q07563 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC25.97■■□□□ 1.75
Col17a1Q07563 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Col17a1Q07563 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col17a1Q07563 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Col17a1Q07563 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col17a1Q07563 Gm8349-201ENSMUST00000182720 1003 ntBASIC25.96■■□□□ 1.75
Col17a1Q07563 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC25.96■■□□□ 1.75
Col17a1Q07563 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col17a1Q07563 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col17a1Q07563 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC25.95■■□□□ 1.75
Col17a1Q07563 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC25.95■■□□□ 1.75
Col17a1Q07563 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col17a1Q07563 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC25.95■■□□□ 1.74
Col17a1Q07563 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col17a1Q07563 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Col17a1Q07563 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC25.95■■□□□ 1.74
Col17a1Q07563 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col17a1Q07563 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col17a1Q07563 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Col17a1Q07563 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col17a1Q07563 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col17a1Q07563 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col17a1Q07563 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col17a1Q07563 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Col17a1Q07563 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col17a1Q07563 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC25.95■■□□□ 1.74
Col17a1Q07563 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
Col17a1Q07563 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Col17a1Q07563 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
Col17a1Q07563 Gm11745-201ENSMUST00000121669 448 ntBASIC25.94■■□□□ 1.74
Col17a1Q07563 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
Col17a1Q07563 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Col17a1Q07563 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Col17a1Q07563 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Col17a1Q07563 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Col17a1Q07563 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Col17a1Q07563 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Col17a1Q07563 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Col17a1Q07563 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Col17a1Q07563 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col17a1Q07563 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col17a1Q07563 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms