Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Gm27000-201ENSMUST00000182943 842 ntBASIC12.42□□□□□ -0.42
Hspg2Q05793 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.42□□□□□ -0.42
Hspg2Q05793 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.42□□□□□ -0.42
Hspg2Q05793 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Gm13418-201ENSMUST00000119097 944 ntBASIC12.42□□□□□ -0.42
Hspg2Q05793 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.42□□□□□ -0.42
Hspg2Q05793 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hspg2Q05793 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.42□□□□□ -0.42
Hspg2Q05793 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hspg2Q05793 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.42□□□□□ -0.42
Hspg2Q05793 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hspg2Q05793 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.42□□□□□ -0.42
Hspg2Q05793 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.42□□□□□ -0.42
Hspg2Q05793 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hspg2Q05793 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.42□□□□□ -0.42
Hspg2Q05793 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hspg2Q05793 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Hspg2Q05793 Gm15173-201ENSMUST00000122049 433 ntBASIC12.41□□□□□ -0.42
Hspg2Q05793 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.41□□□□□ -0.42
Hspg2Q05793 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.41□□□□□ -0.42
Hspg2Q05793 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Hspg2Q05793 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.41□□□□□ -0.42
Hspg2Q05793 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hspg2Q05793 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hspg2Q05793 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.41□□□□□ -0.42
Hspg2Q05793 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hspg2Q05793 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hspg2Q05793 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.4□□□□□ -0.42
Hspg2Q05793 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hspg2Q05793 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm13186-201ENSMUST00000118031 316 ntBASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm24513-201ENSMUST00000174964 138 ntBASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.4□□□□□ -0.42
Hspg2Q05793 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hspg2Q05793 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hspg2Q05793 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.4□□□□□ -0.42
Hspg2Q05793 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hspg2Q05793 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.4□□□□□ -0.42
Hspg2Q05793 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hspg2Q05793 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hspg2Q05793 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.39□□□□□ -0.43
Hspg2Q05793 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms