Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx3-2P97503 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.92■□□□□ 0.14
Nkx3-2P97503 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.92■□□□□ 0.14
Nkx3-2P97503 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx3-2P97503 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Nkx3-2P97503 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx3-2P97503 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Nkx3-2P97503 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.91■□□□□ 0.14
Nkx3-2P97503 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.91■□□□□ 0.14
Nkx3-2P97503 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.9■□□□□ 0.14
Nkx3-2P97503 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx3-2P97503 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.89■□□□□ 0.13
Nkx3-2P97503 Gm9013-201ENSMUST00000132939 882 ntBASIC15.89■□□□□ 0.13
Nkx3-2P97503 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Gm21362-201ENSMUST00000194272 928 ntBASIC15.89■□□□□ 0.13
Nkx3-2P97503 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Gm7213-201ENSMUST00000215977 950 ntBASIC15.89■□□□□ 0.13
Nkx3-2P97503 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx3-2P97503 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx3-2P97503 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx3-2P97503 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx3-2P97503 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx3-2P97503 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx3-2P97503 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Nkx3-2P97503 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx3-2P97503 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx3-2P97503 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx3-2P97503 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.88■□□□□ 0.13
Nkx3-2P97503 Gm33142-201ENSMUST00000193913 867 ntBASIC15.88■□□□□ 0.13
Nkx3-2P97503 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms