Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SgcaP82350 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SgcaP82350 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SgcaP82350 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.18□□□□□ -0.14
SgcaP82350 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.18□□□□□ -0.14
SgcaP82350 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
SgcaP82350 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.17□□□□□ -0.14
SgcaP82350 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.17□□□□□ -0.14
SgcaP82350 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SgcaP82350 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.17□□□□□ -0.14
SgcaP82350 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SgcaP82350 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.17□□□□□ -0.14
SgcaP82350 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcaP82350 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.16□□□□□ -0.14
SgcaP82350 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SgcaP82350 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.16□□□□□ -0.14
SgcaP82350 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SgcaP82350 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SgcaP82350 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.15□□□□□ -0.14
SgcaP82350 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Gm10418-201ENSMUST00000100943 576 ntBASIC14.15□□□□□ -0.14
SgcaP82350 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.15□□□□□ -0.14
SgcaP82350 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SgcaP82350 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SgcaP82350 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcaP82350 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
SgcaP82350 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
SgcaP82350 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SgcaP82350 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SgcaP82350 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcaP82350 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SgcaP82350 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcaP82350 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.14□□□□□ -0.15
SgcaP82350 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcaP82350 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcaP82350 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms