Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SgcbP82349 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.05■□□□□ -0
SgcbP82349 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.05■□□□□ -0
SgcbP82349 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SgcbP82349 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SgcbP82349 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SgcbP82349 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SgcbP82349 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Gm22697-201ENSMUST00000175194 63 ntBASIC15.04■□□□□ -0
SgcbP82349 Gm7370-201ENSMUST00000219471 767 ntBASIC15.04■□□□□ -0
SgcbP82349 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.04■□□□□ -0
SgcbP82349 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.04■□□□□ -0
SgcbP82349 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SgcbP82349 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.04■□□□□ -0
SgcbP82349 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SgcbP82349 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SgcbP82349 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Gm7213-201ENSMUST00000215977 950 ntBASIC15.03■□□□□ -0
SgcbP82349 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.03■□□□□ -0
SgcbP82349 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.03■□□□□ -0
SgcbP82349 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SgcbP82349 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SgcbP82349 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.02■□□□□ -0
SgcbP82349 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.02■□□□□ -0
SgcbP82349 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
SgcbP82349 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SgcbP82349 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.02■□□□□ -0
SgcbP82349 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Gm10013-201ENSMUST00000106074 672 ntBASIC15.02■□□□□ -0
SgcbP82349 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.02■□□□□ -0
SgcbP82349 Gm27389-201ENSMUST00000183622 195 ntBASIC15.02■□□□□ -0
SgcbP82349 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.02■□□□□ -0
SgcbP82349 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SgcbP82349 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
SgcbP82349 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SgcbP82349 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SgcbP82349 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SgcbP82349 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SgcbP82349 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SgcbP82349 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SgcbP82349 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SgcbP82349 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SgcbP82349 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SgcbP82349 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms