Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp3P63024 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp3P63024 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp3P63024 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp3P63024 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Vamp3P63024 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Vamp3P63024 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vamp3P63024 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vamp3P63024 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vamp3P63024 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.02□□□□□ -0.32
Vamp3P63024 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Vamp3P63024 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vamp3P63024 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vamp3P63024 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.02□□□□□ -0.33
Vamp3P63024 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vamp3P63024 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.02□□□□□ -0.33
Vamp3P63024 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.02□□□□□ -0.33
Vamp3P63024 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vamp3P63024 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vamp3P63024 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Vamp3P63024 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.02□□□□□ -0.33
Vamp3P63024 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp3P63024 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.02□□□□□ -0.33
Vamp3P63024 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.02□□□□□ -0.33
Vamp3P63024 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.02□□□□□ -0.33
Vamp3P63024 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vamp3P63024 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Vamp3P63024 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vamp3P63024 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vamp3P63024 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vamp3P63024 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.01□□□□□ -0.33
Vamp3P63024 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vamp3P63024 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13□□□□□ -0.33
Vamp3P63024 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13□□□□□ -0.33
Vamp3P63024 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Vamp3P63024 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Vamp3P63024 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vamp3P63024 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vamp3P63024 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vamp3P63024 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Vamp3P63024 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vamp3P63024 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vamp3P63024 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms