Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ybx1P62960 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.25■□□□□ 0.35
Ybx1P62960 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.25■□□□□ 0.35
Ybx1P62960 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ybx1P62960 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ybx1P62960 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ybx1P62960 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ybx1P62960 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ybx1P62960 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ybx1P62960 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ybx1P62960 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ybx1P62960 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 Gm28659-201ENSMUST00000188013 759 ntBASIC17.24■□□□□ 0.35
Ybx1P62960 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Ybx1P62960 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ybx1P62960 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.23■□□□□ 0.35
Ybx1P62960 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ybx1P62960 Gm13884-201ENSMUST00000118103 829 ntBASIC17.23■□□□□ 0.35
Ybx1P62960 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Gm43347-201ENSMUST00000200226 580 ntBASIC17.23■□□□□ 0.35
Ybx1P62960 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.23■□□□□ 0.35
Ybx1P62960 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ybx1P62960 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ybx1P62960 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ybx1P62960 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ybx1P62960 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ybx1P62960 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ybx1P62960 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ybx1P62960 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ybx1P62960 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.22■□□□□ 0.35
Ybx1P62960 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ybx1P62960 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ybx1P62960 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ybx1P62960 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ybx1P62960 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.22■□□□□ 0.35
Ybx1P62960 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Ybx1P62960 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.21■□□□□ 0.35
Ybx1P62960 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.21■□□□□ 0.35
Ybx1P62960 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.21■□□□□ 0.35
Ybx1P62960 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ybx1P62960 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.21■□□□□ 0.35
Ybx1P62960 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ybx1P62960 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Ybx1P62960 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ybx1P62960 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ybx1P62960 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ybx1P62960 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.2■□□□□ 0.34
Ybx1P62960 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ybx1P62960 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ybx1P62960 Mir8098-201ENSMUST00000184011 137 ntBASIC17.2■□□□□ 0.34
Ybx1P62960 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.2■□□□□ 0.34
Ybx1P62960 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.2■□□□□ 0.34
Ybx1P62960 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ybx1P62960 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ybx1P62960 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.2■□□□□ 0.34
Ybx1P62960 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ybx1P62960 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.2■□□□□ 0.34
Ybx1P62960 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ybx1P62960 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ybx1P62960 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ybx1P62960 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ybx1P62960 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ybx1P62960 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ybx1P62960 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ybx1P62960 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms