Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Lsm6P62313 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm6P62313 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm6P62313 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.77□□□□□ -0.05
Lsm6P62313 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.77□□□□□ -0.05
Lsm6P62313 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.77□□□□□ -0.05
Lsm6P62313 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.77□□□□□ -0.05
Lsm6P62313 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm6P62313 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Lsm6P62313 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Lsm6P62313 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lsm6P62313 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Lsm6P62313 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Lsm6P62313 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Lsm6P62313 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm6P62313 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.76□□□□□ -0.05
Lsm6P62313 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm6P62313 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.76□□□□□ -0.05
Lsm6P62313 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm6P62313 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.76□□□□□ -0.05
Lsm6P62313 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm6P62313 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm6P62313 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm6P62313 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm6P62313 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm6P62313 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm6P62313 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm6P62313 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.75□□□□□ -0.05
Lsm6P62313 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.75□□□□□ -0.05
Lsm6P62313 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.75□□□□□ -0.05
Lsm6P62313 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Lsm6P62313 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Lsm6P62313 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.75□□□□□ -0.05
Lsm6P62313 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.75□□□□□ -0.05
Lsm6P62313 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.75□□□□□ -0.05
Lsm6P62313 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.75□□□□□ -0.05
Lsm6P62313 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.75□□□□□ -0.05
Lsm6P62313 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Lsm6P62313 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.75□□□□□ -0.05
Lsm6P62313 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm6P62313 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Lsm6P62313 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Lsm6P62313 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Lsm6P62313 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Lsm6P62313 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.74□□□□□ -0.05
Lsm6P62313 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.74□□□□□ -0.05
Lsm6P62313 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Lsm6P62313 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.74□□□□□ -0.05
Lsm6P62313 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm6P62313 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm6P62313 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm6P62313 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm6P62313 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.73□□□□□ -0.05
Lsm6P62313 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm6P62313 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm6P62313 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm6P62313 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms