Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SmoP56726 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SmoP56726 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.96■□□□□ 0.31
SmoP56726 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SmoP56726 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SmoP56726 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.96■□□□□ 0.31
SmoP56726 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SmoP56726 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.96■□□□□ 0.31
SmoP56726 Gm18115-201ENSMUST00000221209 621 ntBASIC16.96■□□□□ 0.31
SmoP56726 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SmoP56726 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SmoP56726 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SmoP56726 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SmoP56726 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SmoP56726 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SmoP56726 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SmoP56726 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SmoP56726 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SmoP56726 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SmoP56726 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SmoP56726 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SmoP56726 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SmoP56726 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.95■□□□□ 0.3
SmoP56726 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.95■□□□□ 0.3
SmoP56726 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SmoP56726 Mir770-201ENSMUST00000103252 94 ntBASIC16.95■□□□□ 0.3
SmoP56726 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 Gm17808-201ENSMUST00000200859 894 ntBASIC16.95■□□□□ 0.3
SmoP56726 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SmoP56726 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.95■□□□□ 0.3
SmoP56726 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SmoP56726 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SmoP56726 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SmoP56726 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SmoP56726 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SmoP56726 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SmoP56726 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SmoP56726 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.94■□□□□ 0.3
SmoP56726 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SmoP56726 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SmoP56726 Gm44450-201ENSMUST00000199528 114 ntBASIC16.94■□□□□ 0.3
SmoP56726 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SmoP56726 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SmoP56726 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SmoP56726 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SmoP56726 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SmoP56726 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.94■□□□□ 0.3
SmoP56726 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SmoP56726 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SmoP56726 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SmoP56726 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SmoP56726 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SmoP56726 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SmoP56726 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SmoP56726 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.93■□□□□ 0.3
SmoP56726 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SmoP56726 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.93■□□□□ 0.3
SmoP56726 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SmoP56726 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.93■□□□□ 0.3
SmoP56726 Gm21362-201ENSMUST00000194272 928 ntBASIC16.93■□□□□ 0.3
SmoP56726 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.93■□□□□ 0.3
SmoP56726 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SmoP56726 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SmoP56726 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SmoP56726 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SmoP56726 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SmoP56726 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SmoP56726 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SmoP56726 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.92■□□□□ 0.3
SmoP56726 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.92■□□□□ 0.3
SmoP56726 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SmoP56726 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SmoP56726 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SmoP56726 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SmoP56726 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SmoP56726 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms