Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nub1P54729 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nub1P54729 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.14■□□□□ 0.49
Nub1P54729 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nub1P54729 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nub1P54729 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nub1P54729 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nub1P54729 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nub1P54729 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.14■□□□□ 0.49
Nub1P54729 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nub1P54729 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nub1P54729 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nub1P54729 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nub1P54729 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nub1P54729 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nub1P54729 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nub1P54729 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.13■□□□□ 0.49
Nub1P54729 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nub1P54729 Gm7370-201ENSMUST00000219471 767 ntBASIC18.13■□□□□ 0.49
Nub1P54729 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nub1P54729 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.13■□□□□ 0.49
Nub1P54729 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nub1P54729 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nub1P54729 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nub1P54729 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nub1P54729 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nub1P54729 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Nub1P54729 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nub1P54729 Gm2274-201ENSMUST00000184539 609 ntBASIC18.12■□□□□ 0.49
Nub1P54729 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.12■□□□□ 0.49
Nub1P54729 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nub1P54729 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nub1P54729 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nub1P54729 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nub1P54729 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.11■□□□□ 0.49
Nub1P54729 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nub1P54729 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nub1P54729 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nub1P54729 Gm6433-201ENSMUST00000118634 875 ntBASIC18.11■□□□□ 0.49
Nub1P54729 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nub1P54729 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nub1P54729 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nub1P54729 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nub1P54729 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Nub1P54729 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nub1P54729 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nub1P54729 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nub1P54729 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Nub1P54729 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.1■□□□□ 0.49
Nub1P54729 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nub1P54729 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Nub1P54729 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.1■□□□□ 0.49
Nub1P54729 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nub1P54729 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.1■□□□□ 0.49
Nub1P54729 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Gm18958-201ENSMUST00000174258 762 ntBASIC18.1■□□□□ 0.49
Nub1P54729 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.1■□□□□ 0.49
Nub1P54729 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nub1P54729 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nub1P54729 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nub1P54729 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nub1P54729 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nub1P54729 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nub1P54729 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Nub1P54729 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nub1P54729 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nub1P54729 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Nub1P54729 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nub1P54729 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.09■□□□□ 0.49
Nub1P54729 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nub1P54729 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms