Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Msh6P54276 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Msh6P54276 Gm10052-201ENSMUST00000168019 960 ntBASIC21.36■■□□□ 1.01
Msh6P54276 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Msh6P54276 Gm7729-201ENSMUST00000050143 801 ntBASIC21.36■■□□□ 1.01
Msh6P54276 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh6P54276 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Msh6P54276 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh6P54276 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh6P54276 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh6P54276 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.36■■□□□ 1.01
Msh6P54276 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Msh6P54276 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Msh6P54276 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh6P54276 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Msh6P54276 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.36■■□□□ 1.01
Msh6P54276 Gm18195-201ENSMUST00000207604 706 ntBASIC21.36■■□□□ 1.01
Msh6P54276 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Msh6P54276 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Msh6P54276 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Msh6P54276 Gm9449-201ENSMUST00000207265 1011 ntBASIC21.35■■□□□ 1.01
Msh6P54276 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC21.35■■□□□ 1.01
Msh6P54276 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.34■■□□□ 1.01
Msh6P54276 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC21.34■■□□□ 1.01
Msh6P54276 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh6P54276 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Msh6P54276 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Msh6P54276 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.33■■□□□ 1.01
Msh6P54276 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Msh6P54276 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.33■■□□□ 1
Msh6P54276 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.33■■□□□ 1
Msh6P54276 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Msh6P54276 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Msh6P54276 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.32■■□□□ 1
Msh6P54276 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.32■■□□□ 1
Msh6P54276 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
Msh6P54276 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Msh6P54276 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Msh6P54276 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC21.32■■□□□ 1
Msh6P54276 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC21.32■■□□□ 1
Msh6P54276 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Msh6P54276 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Msh6P54276 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Msh6P54276 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Msh6P54276 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.31■■□□□ 1
Msh6P54276 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Msh6P54276 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Msh6P54276 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Msh6P54276 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Msh6P54276 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.31■■□□□ 1
Msh6P54276 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Msh6P54276 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Msh6P54276 Rps4l-201ENSMUST00000071745 943 ntBASIC21.31■■□□□ 1
Msh6P54276 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
Msh6P54276 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Msh6P54276 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.31■■□□□ 1
Msh6P54276 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.31■■□□□ 1
Msh6P54276 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Msh6P54276 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.31■■□□□ 1
Msh6P54276 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Msh6P54276 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.3■■□□□ 1
Msh6P54276 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Msh6P54276 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Msh6P54276 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.3■■□□□ 1
Msh6P54276 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Msh6P54276 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Msh6P54276 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC21.3■■□□□ 1
Msh6P54276 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Msh6P54276 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.3■■□□□ 1
Msh6P54276 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.3■■□□□ 1
Msh6P54276 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC21.3■■□□□ 1
Msh6P54276 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC21.3■■□□□ 1
Msh6P54276 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Msh6P54276 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Msh6P54276 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Msh6P54276 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Msh6P54276 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms