Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pdx1P52946 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.68■□□□□ 0.26
Pdx1P52946 Gm18959-201ENSMUST00000208954 655 ntBASIC16.68■□□□□ 0.26
Pdx1P52946 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.68■□□□□ 0.26
Pdx1P52946 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Pdx1P52946 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pdx1P52946 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pdx1P52946 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.68■□□□□ 0.26
Pdx1P52946 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdx1P52946 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.67■□□□□ 0.26
Pdx1P52946 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdx1P52946 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pdx1P52946 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pdx1P52946 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pdx1P52946 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdx1P52946 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pdx1P52946 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pdx1P52946 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pdx1P52946 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdx1P52946 Mir5130-201ENSMUST00000175160 84 ntBASIC16.67■□□□□ 0.26
Pdx1P52946 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pdx1P52946 Mir7071-201ENSMUST00000184847 69 ntBASIC16.67■□□□□ 0.26
Pdx1P52946 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pdx1P52946 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pdx1P52946 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.67■□□□□ 0.26
Pdx1P52946 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.67■□□□□ 0.26
Pdx1P52946 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pdx1P52946 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pdx1P52946 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pdx1P52946 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.66■□□□□ 0.26
Pdx1P52946 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pdx1P52946 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.66■□□□□ 0.26
Pdx1P52946 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.66■□□□□ 0.26
Pdx1P52946 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.66■□□□□ 0.26
Pdx1P52946 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Pdx1P52946 Gm45058-201ENSMUST00000205810 766 ntBASIC16.66■□□□□ 0.26
Pdx1P52946 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Pdx1P52946 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.66■□□□□ 0.26
Pdx1P52946 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Pdx1P52946 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pdx1P52946 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdx1P52946 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pdx1P52946 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pdx1P52946 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.65■□□□□ 0.26
Pdx1P52946 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.65■□□□□ 0.26
Pdx1P52946 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.65■□□□□ 0.26
Pdx1P52946 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdx1P52946 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Pdx1P52946 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pdx1P52946 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pdx1P52946 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pdx1P52946 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.64■□□□□ 0.25
Pdx1P52946 Gm10566-201ENSMUST00000086739 996 ntBASIC16.64■□□□□ 0.25
Pdx1P52946 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pdx1P52946 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms