Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SftpbP50405 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.29■□□□□ 0.36
SftpbP50405 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SftpbP50405 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SftpbP50405 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SftpbP50405 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SftpbP50405 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SftpbP50405 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SftpbP50405 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SftpbP50405 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.28■□□□□ 0.36
SftpbP50405 Gm12441-201ENSMUST00000121806 588 ntBASIC17.28■□□□□ 0.36
SftpbP50405 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.28■□□□□ 0.36
SftpbP50405 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SftpbP50405 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SftpbP50405 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SftpbP50405 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SftpbP50405 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SftpbP50405 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SftpbP50405 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SftpbP50405 Gm18666-201ENSMUST00000190039 958 ntBASIC17.27■□□□□ 0.36
SftpbP50405 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.27■□□□□ 0.36
SftpbP50405 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SftpbP50405 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SftpbP50405 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SftpbP50405 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SftpbP50405 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SftpbP50405 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SftpbP50405 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SftpbP50405 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SftpbP50405 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
SftpbP50405 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SftpbP50405 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
SftpbP50405 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SftpbP50405 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SftpbP50405 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SftpbP50405 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SftpbP50405 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.26■□□□□ 0.35
SftpbP50405 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.26■□□□□ 0.35
SftpbP50405 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SftpbP50405 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SftpbP50405 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.26■□□□□ 0.35
SftpbP50405 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.26■□□□□ 0.35
SftpbP50405 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.26■□□□□ 0.35
SftpbP50405 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SftpbP50405 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SftpbP50405 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.25■□□□□ 0.35
SftpbP50405 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.25■□□□□ 0.35
SftpbP50405 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.25■□□□□ 0.35
SftpbP50405 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 Gm43183-201ENSMUST00000200632 547 ntBASIC17.25■□□□□ 0.35
SftpbP50405 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SftpbP50405 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SftpbP50405 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.25■□□□□ 0.35
SftpbP50405 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms