Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ercc3P49135 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ercc3P49135 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ercc3P49135 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ercc3P49135 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20■□□□□ 0.79
Ercc3P49135 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ercc3P49135 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ercc3P49135 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ercc3P49135 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ercc3P49135 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc3P49135 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc3P49135 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ercc3P49135 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ercc3P49135 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc3P49135 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc3P49135 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc3P49135 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc3P49135 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc3P49135 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.99■□□□□ 0.79
Ercc3P49135 Gm16061-201ENSMUST00000122167 857 ntBASIC19.99■□□□□ 0.79
Ercc3P49135 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ercc3P49135 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Ercc3P49135 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc3P49135 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc3P49135 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ercc3P49135 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.99■□□□□ 0.79
Ercc3P49135 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.99■□□□□ 0.79
Ercc3P49135 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.99■□□□□ 0.79
Ercc3P49135 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ercc3P49135 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.98■□□□□ 0.79
Ercc3P49135 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.98■□□□□ 0.79
Ercc3P49135 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Ercc3P49135 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ercc3P49135 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ercc3P49135 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.97■□□□□ 0.79
Ercc3P49135 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.97■□□□□ 0.79
Ercc3P49135 Gm18032-201ENSMUST00000222541 538 ntBASIC19.97■□□□□ 0.79
Ercc3P49135 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ercc3P49135 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ercc3P49135 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ercc3P49135 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ercc3P49135 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ercc3P49135 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc3P49135 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.96■□□□□ 0.79
Ercc3P49135 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc3P49135 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc3P49135 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc3P49135 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.96■□□□□ 0.79
Ercc3P49135 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc3P49135 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc3P49135 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc3P49135 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc3P49135 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc3P49135 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc3P49135 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Ercc3P49135 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc3P49135 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.96■□□□□ 0.79
Ercc3P49135 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc3P49135 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ercc3P49135 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ercc3P49135 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc3P49135 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc3P49135 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.95■□□□□ 0.78
Ercc3P49135 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc3P49135 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc3P49135 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc3P49135 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.95■□□□□ 0.78
Ercc3P49135 Gm22697-201ENSMUST00000175194 63 ntBASIC19.95■□□□□ 0.78
Ercc3P49135 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ercc3P49135 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc3P49135 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc3P49135 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ercc3P49135 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc3P49135 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc3P49135 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc3P49135 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms