Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx2P48379 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rfx2P48379 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx2P48379 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx2P48379 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx2P48379 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx2P48379 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rfx2P48379 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rfx2P48379 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx2P48379 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx2P48379 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Rfx2P48379 Gm7370-201ENSMUST00000219471 767 ntBASIC17.68■□□□□ 0.42
Rfx2P48379 Gm21559-201ENSMUST00000220638 855 ntBASIC17.68■□□□□ 0.42
Rfx2P48379 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx2P48379 Gm8587-201ENSMUST00000076538 843 ntBASIC17.68■□□□□ 0.42
Rfx2P48379 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx2P48379 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx2P48379 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx2P48379 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx2P48379 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rfx2P48379 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rfx2P48379 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rfx2P48379 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx2P48379 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rfx2P48379 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.67■□□□□ 0.42
Rfx2P48379 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx2P48379 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx2P48379 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rfx2P48379 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx2P48379 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx2P48379 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rfx2P48379 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rfx2P48379 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rfx2P48379 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.66■□□□□ 0.42
Rfx2P48379 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.66■□□□□ 0.42
Rfx2P48379 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx2P48379 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Rfx2P48379 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Rfx2P48379 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Gm7213-201ENSMUST00000215977 950 ntBASIC17.65■□□□□ 0.42
Rfx2P48379 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.65■□□□□ 0.42
Rfx2P48379 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx2P48379 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.65■□□□□ 0.42
Rfx2P48379 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rfx2P48379 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.64■□□□□ 0.42
Rfx2P48379 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.64■□□□□ 0.41
Rfx2P48379 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Gm14859-201ENSMUST00000117752 357 ntBASIC17.64■□□□□ 0.41
Rfx2P48379 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx2P48379 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rfx2P48379 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rfx2P48379 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx2P48379 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx2P48379 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx2P48379 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx2P48379 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx2P48379 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rfx2P48379 Gm9013-201ENSMUST00000132939 882 ntBASIC17.63■□□□□ 0.41
Rfx2P48379 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms