Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.11■□□□□ 0.33
Vps4bP46467 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.11■□□□□ 0.33
Vps4bP46467 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Vps4bP46467 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.1■□□□□ 0.33
Vps4bP46467 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Vps4bP46467 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vps4bP46467 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vps4bP46467 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Vps4bP46467 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps4bP46467 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps4bP46467 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Vps4bP46467 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vps4bP46467 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vps4bP46467 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps4bP46467 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.09■□□□□ 0.33
Vps4bP46467 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Vps4bP46467 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Vps4bP46467 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Vps4bP46467 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps4bP46467 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps4bP46467 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps4bP46467 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vps4bP46467 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps4bP46467 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps4bP46467 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps4bP46467 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps4bP46467 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps4bP46467 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps4bP46467 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps4bP46467 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.08■□□□□ 0.32
Vps4bP46467 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.08■□□□□ 0.32
Vps4bP46467 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps4bP46467 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Vps4bP46467 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps4bP46467 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Vps4bP46467 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps4bP46467 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps4bP46467 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps4bP46467 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.07■□□□□ 0.32
Vps4bP46467 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Vps4bP46467 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.07■□□□□ 0.32
Vps4bP46467 Gm10698-201ENSMUST00000182663 604 ntBASIC17.07■□□□□ 0.32
Vps4bP46467 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Vps4bP46467 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps4bP46467 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms