Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcl12P40224 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cxcl12P40224 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cxcl12P40224 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cxcl12P40224 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Gm25990-201ENSMUST00000102440 86 ntBASIC17.38■□□□□ 0.37
Cxcl12P40224 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.38■□□□□ 0.37
Cxcl12P40224 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.38■□□□□ 0.37
Cxcl12P40224 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cxcl12P40224 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcl12P40224 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.37■□□□□ 0.37
Cxcl12P40224 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cxcl12P40224 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cxcl12P40224 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.37■□□□□ 0.37
Cxcl12P40224 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 Gm13418-201ENSMUST00000119097 944 ntBASIC17.37■□□□□ 0.37
Cxcl12P40224 Gm25745-201ENSMUST00000174945 133 ntBASIC17.37■□□□□ 0.37
Cxcl12P40224 Gm4535-201ENSMUST00000182274 558 ntBASIC17.37■□□□□ 0.37
Cxcl12P40224 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 Gm10355-201ENSMUST00000097146 517 ntBASIC17.37■□□□□ 0.37
Cxcl12P40224 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcl12P40224 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.37■□□□□ 0.37
Cxcl12P40224 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Cxcl12P40224 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Cxcl12P40224 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.36■□□□□ 0.37
Cxcl12P40224 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cxcl12P40224 Gm6089-201ENSMUST00000197666 938 ntBASIC17.36■□□□□ 0.37
Cxcl12P40224 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.36■□□□□ 0.37
Cxcl12P40224 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.36■□□□□ 0.37
Cxcl12P40224 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Cxcl12P40224 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cxcl12P40224 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cxcl12P40224 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl12P40224 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl12P40224 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl12P40224 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.35■□□□□ 0.37
Cxcl12P40224 Gm14140-201ENSMUST00000119999 995 ntBASIC17.35■□□□□ 0.37
Cxcl12P40224 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.35■□□□□ 0.37
Cxcl12P40224 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cxcl12P40224 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl12P40224 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl12P40224 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl12P40224 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl12P40224 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl12P40224 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl12P40224 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl12P40224 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl12P40224 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl12P40224 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Cxcl12P40224 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.34■□□□□ 0.37
Cxcl12P40224 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl12P40224 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cxcl12P40224 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cxcl12P40224 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms