Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HmgclP38060 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HmgclP38060 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HmgclP38060 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HmgclP38060 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HmgclP38060 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.6■□□□□ 0.25
HmgclP38060 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.6■□□□□ 0.25
HmgclP38060 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.6■□□□□ 0.25
HmgclP38060 Gm13216-201ENSMUST00000117145 591 ntBASIC16.6■□□□□ 0.25
HmgclP38060 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.6■□□□□ 0.25
HmgclP38060 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.6■□□□□ 0.25
HmgclP38060 Gm7889-201ENSMUST00000185591 958 ntBASIC16.6■□□□□ 0.25
HmgclP38060 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.6■□□□□ 0.25
HmgclP38060 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.6■□□□□ 0.25
HmgclP38060 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.6■□□□□ 0.25
HmgclP38060 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.6■□□□□ 0.25
HmgclP38060 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HmgclP38060 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HmgclP38060 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.59■□□□□ 0.25
HmgclP38060 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.59■□□□□ 0.25
HmgclP38060 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.59■□□□□ 0.25
HmgclP38060 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.59■□□□□ 0.25
HmgclP38060 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HmgclP38060 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HmgclP38060 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HmgclP38060 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HmgclP38060 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HmgclP38060 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
HmgclP38060 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HmgclP38060 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HmgclP38060 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Gm13186-201ENSMUST00000118031 316 ntBASIC16.58■□□□□ 0.24
HmgclP38060 Gm6433-201ENSMUST00000118634 875 ntBASIC16.58■□□□□ 0.24
HmgclP38060 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HmgclP38060 Gm45058-201ENSMUST00000205810 766 ntBASIC16.58■□□□□ 0.24
HmgclP38060 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HmgclP38060 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HmgclP38060 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HmgclP38060 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HmgclP38060 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HmgclP38060 Actl10-202ENSMUST00000226583 1501 ntBASIC16.57■□□□□ 0.24
HmgclP38060 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HmgclP38060 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.57■□□□□ 0.24
HmgclP38060 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HmgclP38060 Gm18959-201ENSMUST00000208954 655 ntBASIC16.57■□□□□ 0.24
HmgclP38060 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.57■□□□□ 0.24
HmgclP38060 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.57■□□□□ 0.24
HmgclP38060 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms