Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.6■□□□□ 0.09
Foxa1P35582 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Foxa1P35582 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Foxa1P35582 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Foxa1P35582 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Foxa1P35582 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Foxa1P35582 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Foxa1P35582 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Foxa1P35582 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Foxa1P35582 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Gm45058-201ENSMUST00000205810 766 ntBASIC15.59■□□□□ 0.09
Foxa1P35582 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.59■□□□□ 0.09
Foxa1P35582 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.59■□□□□ 0.09
Foxa1P35582 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.59■□□□□ 0.09
Foxa1P35582 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Foxa1P35582 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.59■□□□□ 0.09
Foxa1P35582 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Foxa1P35582 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Foxa1P35582 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Foxa1P35582 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Foxa1P35582 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.58■□□□□ 0.09
Foxa1P35582 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Foxa1P35582 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Foxa1P35582 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Foxa1P35582 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Foxa1P35582 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Foxa1P35582 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Foxa1P35582 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Foxa1P35582 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Foxa1P35582 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.58■□□□□ 0.08
Foxa1P35582 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Foxa1P35582 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Foxa1P35582 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Foxa1P35582 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Foxa1P35582 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Foxa1P35582 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Foxa1P35582 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Foxa1P35582 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Foxa1P35582 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.58■□□□□ 0.08
Foxa1P35582 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Foxa1P35582 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Foxa1P35582 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Foxa1P35582 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.57■□□□□ 0.08
Foxa1P35582 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Foxa1P35582 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Foxa1P35582 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Foxa1P35582 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Foxa1P35582 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Foxa1P35582 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Foxa1P35582 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.57■□□□□ 0.08
Foxa1P35582 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Foxa1P35582 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Foxa1P35582 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Foxa1P35582 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Foxa1P35582 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.57■□□□□ 0.08
Foxa1P35582 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Foxa1P35582 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Foxa1P35582 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.57■□□□□ 0.08
Foxa1P35582 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Foxa1P35582 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.57■□□□□ 0.08
Foxa1P35582 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Foxa1P35582 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Foxa1P35582 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.56■□□□□ 0.08
Foxa1P35582 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.56■□□□□ 0.08
Foxa1P35582 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Foxa1P35582 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.56■□□□□ 0.08
Foxa1P35582 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.56■□□□□ 0.08
Foxa1P35582 Gm7213-201ENSMUST00000215977 950 ntBASIC15.56■□□□□ 0.08
Foxa1P35582 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.56■□□□□ 0.08
Foxa1P35582 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Foxa1P35582 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.56■□□□□ 0.08
Foxa1P35582 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Foxa1P35582 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Foxa1P35582 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms