Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp13P33435 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp13P33435 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp13P33435 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp13P33435 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Mmp13P33435 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.26■□□□□ 0.35
Mmp13P33435 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Mmp13P33435 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Mmp13P33435 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.26■□□□□ 0.35
Mmp13P33435 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.26■□□□□ 0.35
Mmp13P33435 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.26■□□□□ 0.35
Mmp13P33435 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.26■□□□□ 0.35
Mmp13P33435 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.26■□□□□ 0.35
Mmp13P33435 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp13P33435 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mmp13P33435 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Mmp13P33435 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.25■□□□□ 0.35
Mmp13P33435 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.25■□□□□ 0.35
Mmp13P33435 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mmp13P33435 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp13P33435 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mmp13P33435 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp13P33435 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp13P33435 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp13P33435 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp13P33435 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp13P33435 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.24■□□□□ 0.35
Mmp13P33435 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp13P33435 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.24■□□□□ 0.35
Mmp13P33435 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp13P33435 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp13P33435 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Mmp13P33435 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mmp13P33435 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp13P33435 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp13P33435 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp13P33435 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Mmp13P33435 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Mmp13P33435 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.23■□□□□ 0.35
Mmp13P33435 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp13P33435 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Mmp13P33435 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp13P33435 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms