Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Mir6349-201ENSMUST00000184059 97 ntBASIC16.02■□□□□ 0.16
Slc6a11P31650 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Slc6a11P31650 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Slc6a11P31650 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a11P31650 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a11P31650 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a11P31650 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a11P31650 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a11P31650 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a11P31650 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a11P31650 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a11P31650 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a11P31650 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.01■□□□□ 0.15
Slc6a11P31650 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.01■□□□□ 0.15
Slc6a11P31650 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a11P31650 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Slc6a11P31650 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a11P31650 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a11P31650 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a11P31650 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a11P31650 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a11P31650 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a11P31650 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a11P31650 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16■□□□□ 0.15
Slc6a11P31650 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Slc6a11P31650 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a11P31650 Gm36858-201ENSMUST00000194501 2391 ntBASIC16■□□□□ 0.15
Slc6a11P31650 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a11P31650 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a11P31650 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a11P31650 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Slc6a11P31650 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.99■□□□□ 0.15
Slc6a11P31650 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Slc6a11P31650 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.99■□□□□ 0.15
Slc6a11P31650 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Gm21362-201ENSMUST00000194272 928 ntBASIC15.99■□□□□ 0.15
Slc6a11P31650 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Gm10138-203ENSMUST00000206952 366 ntBASIC15.99■□□□□ 0.15
Slc6a11P31650 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Slc6a11P31650 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a11P31650 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Slc6a11P31650 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.98■□□□□ 0.15
Slc6a11P31650 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.98■□□□□ 0.15
Slc6a11P31650 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Slc6a11P31650 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a11P31650 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a11P31650 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a11P31650 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a11P31650 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a11P31650 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a11P31650 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a11P31650 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a11P31650 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a11P31650 Gm15375-201ENSMUST00000119510 849 ntBASIC15.97■□□□□ 0.15
Slc6a11P31650 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a11P31650 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.97■□□□□ 0.15
Slc6a11P31650 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc6a11P31650 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms