Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Slc6a13P31649 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.12■□□□□ 0.33
Slc6a13P31649 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc6a13P31649 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc6a13P31649 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a13P31649 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc6a13P31649 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a13P31649 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a13P31649 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a13P31649 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a13P31649 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc6a13P31649 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a13P31649 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a13P31649 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a13P31649 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.11■□□□□ 0.33
Slc6a13P31649 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a13P31649 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a13P31649 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a13P31649 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Slc6a13P31649 Gm7213-201ENSMUST00000215977 950 ntBASIC17.11■□□□□ 0.33
Slc6a13P31649 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a13P31649 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Slc6a13P31649 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a13P31649 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a13P31649 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a13P31649 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a13P31649 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a13P31649 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a13P31649 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc6a13P31649 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc6a13P31649 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a13P31649 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.09■□□□□ 0.33
Slc6a13P31649 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc6a13P31649 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Mir7071-201ENSMUST00000184847 69 ntBASIC17.09■□□□□ 0.33
Slc6a13P31649 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Slc6a13P31649 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc6a13P31649 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Slc6a13P31649 Actl10-202ENSMUST00000226583 1501 ntBASIC17.09■□□□□ 0.33
Slc6a13P31649 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Slc6a13P31649 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a13P31649 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a13P31649 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a13P31649 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a13P31649 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.08■□□□□ 0.32
Slc6a13P31649 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Slc6a13P31649 Gm13474-201ENSMUST00000122466 815 ntBASIC17.08■□□□□ 0.32
Slc6a13P31649 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a13P31649 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Slc6a13P31649 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a13P31649 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a13P31649 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a13P31649 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms