Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl5P30882 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl5P30882 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccl5P30882 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl5P30882 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ccl5P30882 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccl5P30882 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Ccl5P30882 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccl5P30882 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.4■□□□□ 0.38
Ccl5P30882 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccl5P30882 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 Gm11780-201ENSMUST00000136880 516 ntBASIC17.4■□□□□ 0.38
Ccl5P30882 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccl5P30882 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.4■□□□□ 0.38
Ccl5P30882 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccl5P30882 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ccl5P30882 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl5P30882 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccl5P30882 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccl5P30882 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl5P30882 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl5P30882 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccl5P30882 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl5P30882 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccl5P30882 Gm27321-201ENSMUST00000185021 205 ntBASIC17.39■□□□□ 0.37
Ccl5P30882 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.39■□□□□ 0.37
Ccl5P30882 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccl5P30882 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.39■□□□□ 0.37
Ccl5P30882 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl5P30882 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl5P30882 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl5P30882 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl5P30882 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl5P30882 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.39■□□□□ 0.37
Ccl5P30882 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccl5P30882 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ccl5P30882 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl5P30882 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl5P30882 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl5P30882 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Ccl5P30882 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.38■□□□□ 0.37
Ccl5P30882 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Ccl5P30882 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl5P30882 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl5P30882 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ccl5P30882 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.38■□□□□ 0.37
Ccl5P30882 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl5P30882 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl5P30882 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccl5P30882 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl5P30882 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl5P30882 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccl5P30882 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccl5P30882 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl5P30882 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccl5P30882 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl5P30882 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ccl5P30882 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccl5P30882 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl5P30882 Gm12497-201ENSMUST00000138778 237 ntBASIC17.37■□□□□ 0.37
Ccl5P30882 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ccl5P30882 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl5P30882 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl5P30882 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl5P30882 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl5P30882 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl5P30882 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl5P30882 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl5P30882 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl5P30882 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccl5P30882 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccl5P30882 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccl5P30882 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccl5P30882 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.36■□□□□ 0.37
Ccl5P30882 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl5P30882 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.36■□□□□ 0.37
Ccl5P30882 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl5P30882 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl5P30882 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl5P30882 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl5P30882 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl5P30882 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.36■□□□□ 0.37
Ccl5P30882 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ccl5P30882 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ccl5P30882 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl5P30882 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Ccl5P30882 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl5P30882 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl5P30882 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccl5P30882 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms