Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.7■□□□□ 0.1
Nedd8P29595 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.7■□□□□ 0.1
Nedd8P29595 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.7■□□□□ 0.1
Nedd8P29595 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nedd8P29595 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.7■□□□□ 0.1
Nedd8P29595 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Nedd8P29595 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nedd8P29595 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.69■□□□□ 0.1
Nedd8P29595 Gm15546-201ENSMUST00000122095 826 ntBASIC15.69■□□□□ 0.1
Nedd8P29595 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.69■□□□□ 0.1
Nedd8P29595 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.69■□□□□ 0.1
Nedd8P29595 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nedd8P29595 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nedd8P29595 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nedd8P29595 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nedd8P29595 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nedd8P29595 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nedd8P29595 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.68■□□□□ 0.1
Nedd8P29595 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.68■□□□□ 0.1
Nedd8P29595 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nedd8P29595 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nedd8P29595 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.68■□□□□ 0.1
Nedd8P29595 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.68■□□□□ 0.1
Nedd8P29595 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nedd8P29595 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nedd8P29595 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.67■□□□□ 0.1
Nedd8P29595 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nedd8P29595 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Nedd8P29595 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nedd8P29595 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nedd8P29595 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nedd8P29595 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nedd8P29595 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nedd8P29595 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nedd8P29595 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nedd8P29595 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nedd8P29595 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nedd8P29595 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nedd8P29595 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Nedd8P29595 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.66■□□□□ 0.1
Nedd8P29595 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.66■□□□□ 0.1
Nedd8P29595 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nedd8P29595 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nedd8P29595 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Nedd8P29595 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nedd8P29595 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nedd8P29595 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Nedd8P29595 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Nedd8P29595 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nedd8P29595 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nedd8P29595 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nedd8P29595 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nedd8P29595 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nedd8P29595 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nedd8P29595 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nedd8P29595 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Nedd8P29595 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.64■□□□□ 0.09
Nedd8P29595 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nedd8P29595 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nedd8P29595 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nedd8P29595 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nedd8P29595 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.64■□□□□ 0.09
Nedd8P29595 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nedd8P29595 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Nedd8P29595 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms