Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccl6P27784 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccl6P27784 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Gm715-201ENSMUST00000117865 831 ntBASIC13.15□□□□□ -0.3
Ccl6P27784 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccl6P27784 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccl6P27784 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.15□□□□□ -0.3
Ccl6P27784 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccl6P27784 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ccl6P27784 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccl6P27784 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl6P27784 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccl6P27784 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ccl6P27784 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Ccl6P27784 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccl6P27784 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Ccl6P27784 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccl6P27784 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccl6P27784 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccl6P27784 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
Ccl6P27784 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ccl6P27784 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccl6P27784 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.14□□□□□ -0.31
Ccl6P27784 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccl6P27784 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccl6P27784 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl6P27784 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccl6P27784 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccl6P27784 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.13□□□□□ -0.31
Ccl6P27784 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccl6P27784 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.13□□□□□ -0.31
Ccl6P27784 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Ccl6P27784 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.13□□□□□ -0.31
Ccl6P27784 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ccl6P27784 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccl6P27784 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccl6P27784 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl6P27784 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccl6P27784 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Ccl6P27784 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl6P27784 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl6P27784 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl6P27784 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms