Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Pde6bP23440 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Pde6bP23440 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Gm45328-201ENSMUST00000210942 917 ntBASIC18.35■□□□□ 0.53
Pde6bP23440 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.35■□□□□ 0.53
Pde6bP23440 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pde6bP23440 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.35■□□□□ 0.53
Pde6bP23440 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.35■□□□□ 0.53
Pde6bP23440 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pde6bP23440 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.35■□□□□ 0.53
Pde6bP23440 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6bP23440 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.34■□□□□ 0.53
Pde6bP23440 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pde6bP23440 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Mir3081-201ENSMUST00000175305 84 ntBASIC18.34■□□□□ 0.53
Pde6bP23440 Gm27742-201ENSMUST00000184667 60 ntBASIC18.34■□□□□ 0.53
Pde6bP23440 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pde6bP23440 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.34■□□□□ 0.53
Pde6bP23440 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pde6bP23440 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pde6bP23440 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6bP23440 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pde6bP23440 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6bP23440 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6bP23440 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6bP23440 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6bP23440 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.33■□□□□ 0.52
Pde6bP23440 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6bP23440 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6bP23440 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6bP23440 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.33■□□□□ 0.52
Pde6bP23440 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6bP23440 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pde6bP23440 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6bP23440 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6bP23440 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6bP23440 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pde6bP23440 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6bP23440 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6bP23440 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6bP23440 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6bP23440 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.32■□□□□ 0.52
Pde6bP23440 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pde6bP23440 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Pde6bP23440 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Gm7153-201ENSMUST00000117092 455 ntBASIC18.32■□□□□ 0.52
Pde6bP23440 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pde6bP23440 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6bP23440 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.31■□□□□ 0.52
Pde6bP23440 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6bP23440 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6bP23440 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6bP23440 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Pde6bP23440 Gm27357-201ENSMUST00000183754 135 ntBASIC18.31■□□□□ 0.52
Pde6bP23440 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.31■□□□□ 0.52
Pde6bP23440 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6bP23440 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6bP23440 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6bP23440 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6bP23440 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6bP23440 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pde6bP23440 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.31■□□□□ 0.52
Pde6bP23440 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms