Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.68■□□□□ 0.1
Clk1P22518 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk1P22518 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk1P22518 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk1P22518 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clk1P22518 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clk1P22518 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clk1P22518 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Clk1P22518 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.67■□□□□ 0.1
Clk1P22518 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Clk1P22518 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.67■□□□□ 0.1
Clk1P22518 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Clk1P22518 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clk1P22518 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.67■□□□□ 0.1
Clk1P22518 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk1P22518 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Clk1P22518 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.66■□□□□ 0.1
Clk1P22518 Gm715-201ENSMUST00000117865 831 ntBASIC15.66■□□□□ 0.1
Clk1P22518 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Clk1P22518 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.66■□□□□ 0.1
Clk1P22518 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.66■□□□□ 0.1
Clk1P22518 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk1P22518 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.65■□□□□ 0.1
Clk1P22518 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.65■□□□□ 0.1
Clk1P22518 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.65■□□□□ 0.1
Clk1P22518 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.65■□□□□ 0.1
Clk1P22518 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Clk1P22518 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Clk1P22518 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk1P22518 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Clk1P22518 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clk1P22518 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Clk1P22518 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.64■□□□□ 0.09
Clk1P22518 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clk1P22518 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clk1P22518 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clk1P22518 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clk1P22518 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.64■□□□□ 0.09
Clk1P22518 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.64■□□□□ 0.09
Clk1P22518 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.64■□□□□ 0.09
Clk1P22518 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.64■□□□□ 0.09
Clk1P22518 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.64■□□□□ 0.09
Clk1P22518 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clk1P22518 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.64■□□□□ 0.09
Clk1P22518 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clk1P22518 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clk1P22518 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clk1P22518 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clk1P22518 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clk1P22518 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clk1P22518 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clk1P22518 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms