Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.96■□□□□ 0.63
Tpm3P21107 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm3P21107 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Tpm3P21107 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
Tpm3P21107 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.95■□□□□ 0.62
Tpm3P21107 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tpm3P21107 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tpm3P21107 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Tpm3P21107 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.95■□□□□ 0.62
Tpm3P21107 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Tpm3P21107 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.95■□□□□ 0.62
Tpm3P21107 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Tpm3P21107 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm3P21107 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.94■□□□□ 0.62
Tpm3P21107 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.94■□□□□ 0.62
Tpm3P21107 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Gm38285-201ENSMUST00000192928 922 ntBASIC18.94■□□□□ 0.62
Tpm3P21107 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Tpm3P21107 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Tpm3P21107 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Tpm3P21107 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm3P21107 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm3P21107 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.93■□□□□ 0.62
Tpm3P21107 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm3P21107 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Tpm3P21107 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm3P21107 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Tpm3P21107 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Tpm3P21107 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm3P21107 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm3P21107 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm3P21107 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm3P21107 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.93■□□□□ 0.62
Tpm3P21107 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
Tpm3P21107 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm3P21107 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm3P21107 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.93■□□□□ 0.62
Tpm3P21107 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm3P21107 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Tpm3P21107 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Tpm3P21107 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Tpm3P21107 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm3P21107 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm3P21107 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm3P21107 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Tpm3P21107 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.92■□□□□ 0.62
Tpm3P21107 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm3P21107 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm3P21107 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.92■□□□□ 0.62
Tpm3P21107 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm3P21107 Gm6420-201ENSMUST00000193885 723 ntBASIC18.92■□□□□ 0.62
Tpm3P21107 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm3P21107 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm3P21107 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm3P21107 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm3P21107 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm3P21107 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.91■□□□□ 0.62
Tpm3P21107 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm3P21107 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm3P21107 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm3P21107 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms