Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cntn1P12960 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.19■□□□□ 0.18
Cntn1P12960 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntn1P12960 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cntn1P12960 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.18■□□□□ 0.18
Cntn1P12960 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cntn1P12960 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.18■□□□□ 0.18
Cntn1P12960 Gm25016-201ENSMUST00000158399 131 ntBASIC16.18■□□□□ 0.18
Cntn1P12960 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Cntn1P12960 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Cntn1P12960 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cntn1P12960 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cntn1P12960 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cntn1P12960 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cntn1P12960 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.17■□□□□ 0.18
Cntn1P12960 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cntn1P12960 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cntn1P12960 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cntn1P12960 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.17■□□□□ 0.18
Cntn1P12960 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cntn1P12960 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cntn1P12960 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cntn1P12960 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cntn1P12960 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cntn1P12960 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Gm11355-201ENSMUST00000121120 306 ntBASIC16.16■□□□□ 0.18
Cntn1P12960 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.16■□□□□ 0.18
Cntn1P12960 Gm33142-201ENSMUST00000193913 867 ntBASIC16.16■□□□□ 0.18
Cntn1P12960 Gm5587-201ENSMUST00000206270 674 ntBASIC16.16■□□□□ 0.18
Cntn1P12960 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.16■□□□□ 0.18
Cntn1P12960 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cntn1P12960 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cntn1P12960 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.15■□□□□ 0.18
Cntn1P12960 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.15■□□□□ 0.18
Cntn1P12960 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cntn1P12960 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.15■□□□□ 0.18
Cntn1P12960 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cntn1P12960 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.14■□□□□ 0.17
Cntn1P12960 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Gm9013-201ENSMUST00000132939 882 ntBASIC16.14■□□□□ 0.17
Cntn1P12960 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.14■□□□□ 0.17
Cntn1P12960 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cntn1P12960 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.14■□□□□ 0.17
Cntn1P12960 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cntn1P12960 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Cntn1P12960 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cntn1P12960 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.14■□□□□ 0.17
Cntn1P12960 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms