Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl1P12850 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl1P12850 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl1P12850 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl1P12850 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl1P12850 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl1P12850 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cxcl1P12850 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Cxcl1P12850 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl1P12850 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cxcl1P12850 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.98□□□□□ -0.17
Cxcl1P12850 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 Gm11249-201ENSMUST00000117071 859 ntBASIC13.98□□□□□ -0.17
Cxcl1P12850 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cxcl1P12850 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cxcl1P12850 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.98□□□□□ -0.17
Cxcl1P12850 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.98□□□□□ -0.17
Cxcl1P12850 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cxcl1P12850 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl1P12850 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.97□□□□□ -0.17
Cxcl1P12850 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.97□□□□□ -0.17
Cxcl1P12850 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Gm18025-201ENSMUST00000221733 862 ntBASIC13.97□□□□□ -0.17
Cxcl1P12850 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.97□□□□□ -0.17
Cxcl1P12850 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.97□□□□□ -0.17
Cxcl1P12850 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.97□□□□□ -0.17
Cxcl1P12850 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cxcl1P12850 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl1P12850 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.97□□□□□ -0.17
Cxcl1P12850 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cxcl1P12850 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl1P12850 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcl1P12850 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.96□□□□□ -0.18
Cxcl1P12850 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcl1P12850 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcl1P12850 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl1P12850 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl1P12850 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl1P12850 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms