Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Rps4l-201ENSMUST00000071745 943 ntBASIC14.89□□□□□ -0.03
Ccl3P10855 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccl3P10855 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl3P10855 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccl3P10855 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccl3P10855 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl3P10855 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl3P10855 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccl3P10855 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccl3P10855 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl3P10855 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl3P10855 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl3P10855 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl3P10855 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl3P10855 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl3P10855 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl3P10855 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.87□□□□□ -0.03
Ccl3P10855 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccl3P10855 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.87□□□□□ -0.03
Ccl3P10855 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.87□□□□□ -0.03
Ccl3P10855 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.87□□□□□ -0.03
Ccl3P10855 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.87□□□□□ -0.03
Ccl3P10855 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccl3P10855 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Ccl3P10855 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ccl3P10855 Iqck-206ENSMUST00000208658 2891 ntBASIC14.87□□□□□ -0.03
Ccl3P10855 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ccl3P10855 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccl3P10855 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl3P10855 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ccl3P10855 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccl3P10855 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Gm27867-201ENSMUST00000184778 125 ntBASIC14.86□□□□□ -0.03
Ccl3P10855 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.86□□□□□ -0.03
Ccl3P10855 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.86□□□□□ -0.03
Ccl3P10855 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.86□□□□□ -0.03
Ccl3P10855 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccl3P10855 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl3P10855 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.85□□□□□ -0.03
Ccl3P10855 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Gm2651-201ENSMUST00000203560 838 ntBASIC14.85□□□□□ -0.03
Ccl3P10855 Gm18206-201ENSMUST00000207027 926 ntBASIC14.85□□□□□ -0.03
Ccl3P10855 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Ccl3P10855 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.85□□□□□ -0.03
Ccl3P10855 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl3P10855 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ccl3P10855 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl3P10855 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl3P10855 Gm15165-201ENSMUST00000118140 502 ntBASIC14.84□□□□□ -0.03
Ccl3P10855 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms