Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hoxc6P10629 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc6P10629 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hoxc6P10629 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.68■□□□□ 0.58
Hoxc6P10629 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hoxc6P10629 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hoxc6P10629 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc6P10629 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Gm37935-201ENSMUST00000192012 982 ntBASIC18.67■□□□□ 0.58
Hoxc6P10629 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc6P10629 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hoxc6P10629 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc6P10629 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc6P10629 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc6P10629 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.66■□□□□ 0.58
Hoxc6P10629 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc6P10629 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.66■□□□□ 0.58
Hoxc6P10629 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.66■□□□□ 0.58
Hoxc6P10629 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc6P10629 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.66■□□□□ 0.58
Hoxc6P10629 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.66■□□□□ 0.58
Hoxc6P10629 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.66■□□□□ 0.58
Hoxc6P10629 Gm6376-201ENSMUST00000209407 580 ntBASIC18.66■□□□□ 0.58
Hoxc6P10629 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.66■□□□□ 0.58
Hoxc6P10629 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.66■□□□□ 0.58
Hoxc6P10629 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hoxc6P10629 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc6P10629 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Hoxc6P10629 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc6P10629 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc6P10629 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxc6P10629 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxc6P10629 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.65■□□□□ 0.58
Hoxc6P10629 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hoxc6P10629 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.65■□□□□ 0.58
Hoxc6P10629 Gm44454-201ENSMUST00000198541 138 ntBASIC18.65■□□□□ 0.58
Hoxc6P10629 Gm8969-201ENSMUST00000199694 526 ntBASIC18.65■□□□□ 0.58
Hoxc6P10629 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.65■□□□□ 0.58
Hoxc6P10629 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hoxc6P10629 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc6P10629 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hoxc6P10629 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxc6P10629 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.64■□□□□ 0.57
Hoxc6P10629 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc6P10629 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc6P10629 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Hoxc6P10629 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.64■□□□□ 0.57
Hoxc6P10629 Gm15165-201ENSMUST00000118140 502 ntBASIC18.64■□□□□ 0.57
Hoxc6P10629 Gm1401-201ENSMUST00000122048 772 ntBASIC18.64■□□□□ 0.57
Hoxc6P10629 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc6P10629 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.64■□□□□ 0.57
Hoxc6P10629 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.64■□□□□ 0.57
Hoxc6P10629 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc6P10629 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc6P10629 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc6P10629 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.64■□□□□ 0.57
Hoxc6P10629 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc6P10629 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Hoxc6P10629 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc6P10629 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc6P10629 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms