Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PtcraP0C6B2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.63□□□□□ -0.07
PtcraP0C6B2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Gm43799-201ENSMUST00000201845 579 ntBASIC14.63□□□□□ -0.07
PtcraP0C6B2 Gm45058-201ENSMUST00000205810 766 ntBASIC14.63□□□□□ -0.07
PtcraP0C6B2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.63□□□□□ -0.07
PtcraP0C6B2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PtcraP0C6B2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Gm13186-201ENSMUST00000118031 316 ntBASIC14.62□□□□□ -0.07
PtcraP0C6B2 Gm6433-201ENSMUST00000118634 875 ntBASIC14.62□□□□□ -0.07
PtcraP0C6B2 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.62□□□□□ -0.07
PtcraP0C6B2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.62□□□□□ -0.07
PtcraP0C6B2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PtcraP0C6B2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Gm13216-201ENSMUST00000117145 591 ntBASIC14.61□□□□□ -0.07
PtcraP0C6B2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.61□□□□□ -0.07
PtcraP0C6B2 Mir1668-201ENSMUST00000184114 107 ntBASIC14.61□□□□□ -0.07
PtcraP0C6B2 Mir6982-201ENSMUST00000184354 68 ntBASIC14.61□□□□□ -0.07
PtcraP0C6B2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.61□□□□□ -0.07
PtcraP0C6B2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.61□□□□□ -0.07
PtcraP0C6B2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PtcraP0C6B2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PtcraP0C6B2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PtcraP0C6B2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PtcraP0C6B2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PtcraP0C6B2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms