Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PrnpP04925 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PrnpP04925 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PrnpP04925 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrnpP04925 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PrnpP04925 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.47■□□□□ 0.39
PrnpP04925 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PrnpP04925 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PrnpP04925 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrnpP04925 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrnpP04925 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrnpP04925 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PrnpP04925 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrnpP04925 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PrnpP04925 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
PrnpP04925 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.46■□□□□ 0.39
PrnpP04925 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.46■□□□□ 0.39
PrnpP04925 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Rps4l-201ENSMUST00000071745 943 ntBASIC17.46■□□□□ 0.39
PrnpP04925 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PrnpP04925 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.46■□□□□ 0.39
PrnpP04925 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PrnpP04925 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
PrnpP04925 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PrnpP04925 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PrnpP04925 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PrnpP04925 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PrnpP04925 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PrnpP04925 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.45■□□□□ 0.38
PrnpP04925 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PrnpP04925 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PrnpP04925 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PrnpP04925 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PrnpP04925 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.44■□□□□ 0.38
PrnpP04925 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.44■□□□□ 0.38
PrnpP04925 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.44■□□□□ 0.38
PrnpP04925 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.44■□□□□ 0.38
PrnpP04925 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PrnpP04925 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.44■□□□□ 0.38
PrnpP04925 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PrnpP04925 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PrnpP04925 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PrnpP04925 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PrnpP04925 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PrnpP04925 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PrnpP04925 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PrnpP04925 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PrnpP04925 Gm44430-201ENSMUST00000203376 995 ntBASIC17.43■□□□□ 0.38
PrnpP04925 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PrnpP04925 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PrnpP04925 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PrnpP04925 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PrnpP04925 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PrnpP04925 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PrnpP04925 Gm8969-201ENSMUST00000199694 526 ntBASIC17.42■□□□□ 0.38
PrnpP04925 AW822252-206ENSMUST00000208904 237 ntBASIC17.42■□□□□ 0.38
PrnpP04925 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.42■□□□□ 0.38
PrnpP04925 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PrnpP04925 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PrnpP04925 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PrnpP04925 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PrnpP04925 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms