Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Gm7514-201ENSMUST00000209475 934 ntBASIC14.85□□□□□ -0.03
P04224 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
P04224 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.85□□□□□ -0.03
P04224 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
P04224 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.85□□□□□ -0.03
P04224 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04224 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
P04224 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
P04224 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
P04224 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.84□□□□□ -0.03
P04224 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.84□□□□□ -0.03
P04224 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
P04224 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04224 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
P04224 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
P04224 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
P04224 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
P04224 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
P04224 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P04224 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P04224 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
P04224 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
P04224 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.83□□□□□ -0.04
P04224 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
P04224 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.83□□□□□ -0.04
P04224 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04224 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
P04224 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P04224 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P04224 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P04224 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
P04224 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
P04224 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.82□□□□□ -0.04
P04224 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
P04224 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
P04224 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.82□□□□□ -0.04
P04224 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P04224 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
P04224 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.82□□□□□ -0.04
P04224 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P04224 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P04224 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
P04224 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
P04224 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.81□□□□□ -0.04
P04224 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.81□□□□□ -0.04
P04224 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.81□□□□□ -0.04
P04224 Gm18671-201ENSMUST00000214826 683 ntBASIC14.81□□□□□ -0.04
P04224 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
P04224 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
P04224 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms