Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H3f3cP02301 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3f3cP02301 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
H3f3cP02301 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3f3cP02301 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3f3cP02301 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3f3cP02301 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
H3f3cP02301 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H3f3cP02301 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3f3cP02301 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
H3f3cP02301 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3cP02301 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
H3f3cP02301 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3cP02301 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.46□□□□□ -0.09
H3f3cP02301 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3cP02301 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3cP02301 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3cP02301 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3cP02301 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3cP02301 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3cP02301 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.46□□□□□ -0.09
H3f3cP02301 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3cP02301 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3cP02301 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
H3f3cP02301 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3cP02301 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.46□□□□□ -0.09
H3f3cP02301 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3cP02301 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3cP02301 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3cP02301 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3cP02301 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3cP02301 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
H3f3cP02301 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
H3f3cP02301 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.45□□□□□ -0.1
H3f3cP02301 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
H3f3cP02301 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
H3f3cP02301 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
H3f3cP02301 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H3f3cP02301 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
H3f3cP02301 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
H3f3cP02301 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
H3f3cP02301 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
H3f3cP02301 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
H3f3cP02301 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3cP02301 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.45□□□□□ -0.1
H3f3cP02301 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H3f3cP02301 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.44□□□□□ -0.1
H3f3cP02301 Gm11539-201ENSMUST00000119837 557 ntBASIC14.44□□□□□ -0.1
H3f3cP02301 Gm13436-201ENSMUST00000120418 567 ntBASIC14.44□□□□□ -0.1
H3f3cP02301 Gm13559-201ENSMUST00000120476 863 ntBASIC14.44□□□□□ -0.1
H3f3cP02301 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.44□□□□□ -0.1
H3f3cP02301 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
H3f3cP02301 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
H3f3cP02301 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
H3f3cP02301 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
H3f3cP02301 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H3f3cP02301 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3cP02301 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
H3f3cP02301 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3cP02301 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3cP02301 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
H3f3cP02301 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3cP02301 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3cP02301 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3cP02301 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms