Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.19■□□□□ 0.5
Vti1aO89116 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vti1aO89116 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vti1aO89116 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vti1aO89116 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vti1aO89116 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vti1aO89116 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Vti1aO89116 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vti1aO89116 Gm26039-201ENSMUST00000158152 144 ntBASIC18.18■□□□□ 0.5
Vti1aO89116 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.18■□□□□ 0.5
Vti1aO89116 Gm17807-201ENSMUST00000186869 298 ntBASIC18.18■□□□□ 0.5
Vti1aO89116 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vti1aO89116 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.18■□□□□ 0.5
Vti1aO89116 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.18■□□□□ 0.5
Vti1aO89116 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Vti1aO89116 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vti1aO89116 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vti1aO89116 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vti1aO89116 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vti1aO89116 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vti1aO89116 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vti1aO89116 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vti1aO89116 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vti1aO89116 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vti1aO89116 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vti1aO89116 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.18■□□□□ 0.5
Vti1aO89116 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vti1aO89116 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vti1aO89116 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.17■□□□□ 0.5
Vti1aO89116 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vti1aO89116 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vti1aO89116 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vti1aO89116 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vti1aO89116 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.16■□□□□ 0.5
Vti1aO89116 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.16■□□□□ 0.5
Vti1aO89116 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Vti1aO89116 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vti1aO89116 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vti1aO89116 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vti1aO89116 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vti1aO89116 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.15■□□□□ 0.5
Vti1aO89116 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.15■□□□□ 0.5
Vti1aO89116 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Vti1aO89116 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.15■□□□□ 0.5
Vti1aO89116 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.15■□□□□ 0.5
Vti1aO89116 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.15■□□□□ 0.5
Vti1aO89116 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.15■□□□□ 0.5
Vti1aO89116 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Vti1aO89116 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vti1aO89116 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Vti1aO89116 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vti1aO89116 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Vti1aO89116 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vti1aO89116 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vti1aO89116 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Vti1aO89116 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.14■□□□□ 0.49
Vti1aO89116 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.14■□□□□ 0.49
Vti1aO89116 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vti1aO89116 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.14■□□□□ 0.49
Vti1aO89116 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vti1aO89116 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vti1aO89116 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vti1aO89116 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vti1aO89116 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Vti1aO89116 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vti1aO89116 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vti1aO89116 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Vti1aO89116 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms