Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hdac3O88895 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hdac3O88895 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hdac3O88895 Dancr-204ENSMUST00000132389 2347 ntBASIC15.09■□□□□ 0.01
Hdac3O88895 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hdac3O88895 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hdac3O88895 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hdac3O88895 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hdac3O88895 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hdac3O88895 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hdac3O88895 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hdac3O88895 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Hdac3O88895 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.08■□□□□ 0
Hdac3O88895 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.08■□□□□ 0
Hdac3O88895 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.08■□□□□ 0
Hdac3O88895 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.08■□□□□ 0
Hdac3O88895 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Hdac3O88895 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Hdac3O88895 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Hdac3O88895 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac3O88895 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.08■□□□□ 0
Hdac3O88895 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.07■□□□□ 0
Hdac3O88895 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Gm22240-201ENSMUST00000175225 82 ntBASIC15.07■□□□□ 0
Hdac3O88895 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hdac3O88895 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Hdac3O88895 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac3O88895 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hdac3O88895 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Hdac3O88895 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.06■□□□□ 0
Hdac3O88895 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.06■□□□□ 0
Hdac3O88895 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.06■□□□□ 0
Hdac3O88895 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hdac3O88895 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Hdac3O88895 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Hdac3O88895 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hdac3O88895 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hdac3O88895 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hdac3O88895 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hdac3O88895 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.05■□□□□ 0
Hdac3O88895 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.05■□□□□ -0
Hdac3O88895 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.05■□□□□ -0
Hdac3O88895 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Hdac3O88895 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hdac3O88895 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.04■□□□□ -0
Hdac3O88895 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms