Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sh2d1aO88890 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.95□□□□□ -0.5
Sh2d1aO88890 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.95□□□□□ -0.5
Sh2d1aO88890 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh2d1aO88890 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Gm15378-201ENSMUST00000121894 207 ntBASIC11.94□□□□□ -0.5
Sh2d1aO88890 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Gm4974-201ENSMUST00000209974 875 ntBASIC11.94□□□□□ -0.5
Sh2d1aO88890 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.94□□□□□ -0.5
Sh2d1aO88890 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.93□□□□□ -0.5
Sh2d1aO88890 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Gm10698-201ENSMUST00000182663 604 ntBASIC11.93□□□□□ -0.5
Sh2d1aO88890 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sh2d1aO88890 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms