Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.45■□□□□ 0.54
Apba3O88888 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Apba3O88888 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Apba3O88888 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Apba3O88888 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Apba3O88888 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Apba3O88888 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.45■□□□□ 0.54
Apba3O88888 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Apba3O88888 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.45■□□□□ 0.54
Apba3O88888 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Apba3O88888 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Apba3O88888 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Apba3O88888 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Apba3O88888 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.44■□□□□ 0.54
Apba3O88888 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Apba3O88888 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.44■□□□□ 0.54
Apba3O88888 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Apba3O88888 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Apba3O88888 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Apba3O88888 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Apba3O88888 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Apba3O88888 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Apba3O88888 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.44■□□□□ 0.54
Apba3O88888 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Apba3O88888 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.43■□□□□ 0.54
Apba3O88888 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Apba3O88888 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.43■□□□□ 0.54
Apba3O88888 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Apba3O88888 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Apba3O88888 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Apba3O88888 Gm17807-201ENSMUST00000186869 298 ntBASIC18.43■□□□□ 0.54
Apba3O88888 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.43■□□□□ 0.54
Apba3O88888 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Apba3O88888 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Apba3O88888 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Apba3O88888 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Apba3O88888 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.43■□□□□ 0.54
Apba3O88888 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.43■□□□□ 0.54
Apba3O88888 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Apba3O88888 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Apba3O88888 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Apba3O88888 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.42■□□□□ 0.54
Apba3O88888 Olfr129-201ENSMUST00000122318 993 ntBASIC18.42■□□□□ 0.54
Apba3O88888 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.42■□□□□ 0.54
Apba3O88888 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.42■□□□□ 0.54
Apba3O88888 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Gm27742-201ENSMUST00000184667 60 ntBASIC18.42■□□□□ 0.54
Apba3O88888 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.42■□□□□ 0.54
Apba3O88888 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.42■□□□□ 0.54
Apba3O88888 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Apba3O88888 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Apba3O88888 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apba3O88888 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Apba3O88888 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Apba3O88888 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Apba3O88888 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.41■□□□□ 0.54
Apba3O88888 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.41■□□□□ 0.54
Apba3O88888 Gm28033-201ENSMUST00000184224 96 ntBASIC18.41■□□□□ 0.54
Apba3O88888 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Apba3O88888 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Apba3O88888 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Apba3O88888 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Apba3O88888 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Apba3O88888 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Apba3O88888 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Apba3O88888 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Apba3O88888 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Apba3O88888 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Apba3O88888 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.4■□□□□ 0.54
Apba3O88888 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.4■□□□□ 0.54
Apba3O88888 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Apba3O88888 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Apba3O88888 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.4■□□□□ 0.54
Apba3O88888 Gm44450-201ENSMUST00000199528 114 ntBASIC18.4■□□□□ 0.54
Apba3O88888 Gm45328-201ENSMUST00000210942 917 ntBASIC18.4■□□□□ 0.54
Apba3O88888 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.4■□□□□ 0.54
Apba3O88888 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Apba3O88888 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Apba3O88888 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Apba3O88888 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.39■□□□□ 0.54
Apba3O88888 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Apba3O88888 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Apba3O88888 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.39■□□□□ 0.53
Apba3O88888 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Apba3O88888 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Apba3O88888 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.39■□□□□ 0.53
Apba3O88888 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms