Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cops6O88545 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cops6O88545 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.57■□□□□ 0.88
Cops6O88545 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cops6O88545 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cops6O88545 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cops6O88545 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cops6O88545 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cops6O88545 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cops6O88545 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.56■□□□□ 0.88
Cops6O88545 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cops6O88545 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cops6O88545 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cops6O88545 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.56■□□□□ 0.88
Cops6O88545 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.56■□□□□ 0.88
Cops6O88545 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cops6O88545 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cops6O88545 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cops6O88545 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cops6O88545 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cops6O88545 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.56■□□□□ 0.88
Cops6O88545 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cops6O88545 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.56■□□□□ 0.88
Cops6O88545 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.55■□□□□ 0.88
Cops6O88545 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.55■□□□□ 0.88
Cops6O88545 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.55■□□□□ 0.88
Cops6O88545 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cops6O88545 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.54■□□□□ 0.88
Cops6O88545 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.54■□□□□ 0.88
Cops6O88545 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cops6O88545 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.54■□□□□ 0.88
Cops6O88545 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops6O88545 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops6O88545 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops6O88545 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cops6O88545 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops6O88545 Gm15372-201ENSMUST00000120729 834 ntBASIC20.53■□□□□ 0.88
Cops6O88545 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.53■□□□□ 0.88
Cops6O88545 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops6O88545 Gm43347-201ENSMUST00000200226 580 ntBASIC20.53■□□□□ 0.88
Cops6O88545 Mzt1-203ENSMUST00000227948 952 ntBASIC20.53■□□□□ 0.88
Cops6O88545 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cops6O88545 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops6O88545 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cops6O88545 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops6O88545 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.53■□□□□ 0.88
Cops6O88545 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cops6O88545 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops6O88545 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops6O88545 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cops6O88545 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cops6O88545 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cops6O88545 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cops6O88545 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.52■□□□□ 0.88
Cops6O88545 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.52■□□□□ 0.88
Cops6O88545 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cops6O88545 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.52■□□□□ 0.88
Cops6O88545 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cops6O88545 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cops6O88545 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cops6O88545 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cops6O88545 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cops6O88545 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.52■□□□□ 0.87
Cops6O88545 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cops6O88545 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Cops6O88545 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cops6O88545 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cops6O88545 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cops6O88545 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cops6O88545 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cops6O88545 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cops6O88545 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.51■□□□□ 0.87
Cops6O88545 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.51■□□□□ 0.87
Cops6O88545 Gm28659-201ENSMUST00000188013 759 ntBASIC20.51■□□□□ 0.87
Cops6O88545 Gm5864-201ENSMUST00000202263 970 ntBASIC20.51■□□□□ 0.87
Cops6O88545 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms