Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dnmt3aO88508 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dnmt3aO88508 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dnmt3aO88508 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Dnmt3aO88508 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.94■□□□□ 0.3
Dnmt3aO88508 Gm2274-201ENSMUST00000184539 609 ntBASIC16.94■□□□□ 0.3
Dnmt3aO88508 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.94■□□□□ 0.3
Dnmt3aO88508 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Dnmt3aO88508 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.93■□□□□ 0.3
Dnmt3aO88508 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dnmt3aO88508 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Gm9987-201ENSMUST00000069768 567 ntBASIC16.92■□□□□ 0.3
Dnmt3aO88508 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dnmt3aO88508 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Dnmt3aO88508 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Dnmt3aO88508 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Dnmt3aO88508 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dnmt3aO88508 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dnmt3aO88508 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.9■□□□□ 0.3
Dnmt3aO88508 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dnmt3aO88508 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.9■□□□□ 0.3
Dnmt3aO88508 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dnmt3aO88508 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dnmt3aO88508 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.9■□□□□ 0.3
Dnmt3aO88508 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dnmt3aO88508 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.9■□□□□ 0.3
Dnmt3aO88508 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Dnmt3aO88508 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dnmt3aO88508 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms